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WormBase Tree Display for CDS: PPA16180

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Name Class

PPA16180SMapS_parentSequencePPA_ChrII
StructureSource_exons (14)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S273-9.16
TREEFAMTREEFAM_IDTF300574
DB_remarkPPA-DAF-22.1 protein; contains similarity to Pfam domains PF02036 (SCP-2 sterol transfer family), PF02803 (Thiolase, C-terminal domain); contains similarity to Interpro domains IPR020617 (Thiolase, C-terminal), IPR016039 (Thiolase-like), IPR003033 (SCP2 sterol-binding domain), IPR036527 (SCP2 sterol-binding domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00105734
Corresponding_transcriptPPA16180.1
Corresponding_proteinPP70076
Corresponding_oligo_setGPL14372_Probes_79421
GPL14372_Probes_79422
GPL14372_Probes_79423
Microarray_resultsGPL14372_Probes_79421
GPL14372_Probes_79422
GPL14372_Probes_79423
RNASeq_FPKMWBls:000003214.4763From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010134.197From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S273-9.16Curator_confirmedWBPerson4055
Methodcurated