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WormBase Tree Display for CDS: PPA16400

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Name Class

PPA16400SMapS_parentSequencePPA_ChrIV
StructureSource_exons1132
204263
320410
570707
10791170
12421440
16611788
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2840-49.15
DB_remarkcontains similarity to Pfam domain PF00106 (short chain dehydrogenase); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR002347 (Short-chain dehydrogenase/reductase SDR)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
End_not_found
VisibleGeneWBGene00105954
Corresponding_transcriptPPA16400.1
Corresponding_proteinPP65311
Corresponding_oligo_setGPL14372_Probes_20252
GPL14372_Probes_20254
GPL14372_Probes_20255
Microarray_resultsGPL14372_Probes_20252
GPL14372_Probes_20254
GPL14372_Probes_20255
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2840-49.15Curator_confirmedWBPerson4055
Methodcurated