WormBase Tree Display for CDS: PPA16689
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PPA16689 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons (15) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2847-6.49 | ||
DB_remark | contains similarity to Pfam domain PF01663 (Type I phosphodiesterase / nucleotide pyrophosphatase); contains similarity to Interpro domains IPR029879 (), IPR002591 (Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase), IPR017850 (Alkaline-phosphatase-like, core domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00106243 | ||||
Corresponding_transcript | PPA16689.1 | |||||
Corresponding_protein | PP63626 | |||||
Corresponding_oligo_set | GPL14372_Probes_76358 | |||||
GPL14372_Probes_76359 | ||||||
GPL14372_Probes_76360 | ||||||
GPL14372_Probes_76361 | ||||||
Microarray_results | GPL14372_Probes_76358 | |||||
GPL14372_Probes_76359 | ||||||
GPL14372_Probes_76360 | ||||||
GPL14372_Probes_76361 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2847-6.49 | Curator_confirmed | WBPerson4055 | |||
Method | curated |