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WormBase Tree Display for CDS: PPA16689

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Name Class

PPA16689SMapS_parentSequencePPA_ChrIV
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2847-6.49
DB_remarkcontains similarity to Pfam domain PF01663 (Type I phosphodiesterase / nucleotide pyrophosphatase); contains similarity to Interpro domains IPR029879 (), IPR002591 (Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase), IPR017850 (Alkaline-phosphatase-like, core domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00106243
Corresponding_transcriptPPA16689.1
Corresponding_proteinPP63626
Corresponding_oligo_setGPL14372_Probes_76358
GPL14372_Probes_76359
GPL14372_Probes_76360
GPL14372_Probes_76361
Microarray_resultsGPL14372_Probes_76358
GPL14372_Probes_76359
GPL14372_Probes_76360
GPL14372_Probes_76361
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2847-6.49Curator_confirmedWBPerson4055
Methodcurated