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WormBase Tree Display for CDS: PPA16702

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Name Class

PPA16702SMapS_parentSequencePPA_ChrIV
StructureSource_exons (20)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2847-6.36
DB_remarkPPA-ATLN-2 protein; contains similarity to Pfam domain PF02263 (Guanylate-binding protein, N-terminal domain); contains similarity to Interpro domains IPR036543 (Guanylate-binding protein, C-terminal domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR015894 (Guanylate-binding protein, N-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00106256
Corresponding_transcriptPPA16702.1
Corresponding_proteinPP60526
Corresponding_oligo_setGPL14372_Probes_23793
GPL14372_Probes_76373
Microarray_resultsGPL14372_Probes_23793
GPL14372_Probes_76373
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2847-6.36Curator_confirmedWBPerson4055
Methodcurated