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WormBase Tree Display for CDS: PPA16893

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Name Class

PPA16893SMapS_parentSequencePPA_ChrI
StructureSource_exons (14)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2842-9.69
DB_remarkcontains similarity to Pfam domain PF02931 (Neurotransmitter-gated ion-channel ligand binding domain); contains similarity to Interpro domains IPR036734 (Neurotransmitter-gated ion-channel ligand-binding domain superfamily), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding domain), IPR036719 (Neurotransmitter-gated ion-channel transmembrane domain superfamily), IPR006201 (Neurotransmitter-gated ion-channel)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00106447
Corresponding_transcriptPPA16893.1
Corresponding_proteinPP67609
Corresponding_oligo_setGPL14372_Probes_14439
GPL14372_Probes_14441
GPL14372_Probes_14442
Microarray_resultsGPL14372_Probes_14439
GPL14372_Probes_14441
GPL14372_Probes_14442
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2842-9.69Curator_confirmedWBPerson4055
Methodcurated