WormBase Tree Display for CDS: PPA16918
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PPA16918 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (21) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2842-7.4 | ||
DB_remark | PPA-FRM-10 protein; contains similarity to Pfam domain PF00373 (FERM central domain); contains similarity to Interpro domains IPR014352 (FERM/acyl-CoA-binding protein superfamily), IPR019748 (FERM central domain), IPR035963 (FERM superfamily, second domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00106472 | ||||
Corresponding_transcript | PPA16918.1 | |||||
Corresponding_protein | PP64418 | |||||
Corresponding_oligo_set | GPL14372_Probes_14473 | |||||
GPL14372_Probes_14474 | ||||||
GPL14372_Probes_61226 | ||||||
GPL14372_Probes_61227 | ||||||
GPL14372_Probes_61228 | ||||||
Microarray_results | GPL14372_Probes_14473 | |||||
GPL14372_Probes_14474 | ||||||
GPL14372_Probes_61226 | ||||||
GPL14372_Probes_61227 | ||||||
GPL14372_Probes_61228 | ||||||
RNASeq_FPKM | WBls:0000032 | 1.7664 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2842-7.4 | Curator_confirmed | WBPerson4055 | |||
Method | curated |