WormBase Tree Display for CDS: PPA16922

PPA16922 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 15
      65 178
      504 582
      683 784
      927 1030
      1081 1172
      1358 1424
      1609 1704
      1925 2008
      2148 2267
  DB_info: Database: pristionchus.org cds gene-UMM-S2842-7.9
      TREEFAM TREEFAM_ID TF300176
    DB_remark: PPA-GID-8 protein; contains similarity to Pfam domains PF08513 (LisH), PF10607 (CTLH/CRA C-terminal to LisH motif domain); contains similarity to Interpro domains IPR006594 (LIS1 homology motif), IPR006595 (CTLH, C-terminal LisH motif), IPR013144 (CRA domain), IPR024964 (CTLH/CRA C-terminal to LisH motif domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00106476
    Corresponding_transcript: PPA16922.1
    Corresponding_protein: PP27280
    Corresponding_oligo_set: GPL14372_Probes_14476
      GPL14372_Probes_14477
      GPL14372_Probes_14478
      GPL14372_Probes_14479
    Microarray_results: GPL14372_Probes_14476
      GPL14372_Probes_14477
      GPL14372_Probes_14478
      GPL14372_Probes_14479
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 11.3811 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S2842-7.9 Curator_confirmed: WBPerson4055
  Method: curated