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WormBase Tree Display for CDS: PPA16991

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Name Class

PPA16991SMapS_parentSequencePPA_ChrI
StructureSource_exons (35)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2842-2.10
TREEFAMTREEFAM_IDTF312988
DB_remarkcontains similarity to Pfam domain PF01694 (Rhomboid family); contains similarity to Interpro domains IPR022764 (Peptidase S54, rhomboid domain), IPR035952 (Rhomboid-like superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00106545
Corresponding_transcriptPPA16991.1
Corresponding_proteinPP71595
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2842-2.10Curator_confirmedWBPerson4055
Methodcurated