WormBase Tree Display for CDS: PPA16997
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PPA16997 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 27 | |||
371 | 481 | |||||
743 | 856 | |||||
1048 | 1180 | |||||
2448 | 2503 | |||||
2665 | 2750 | |||||
3981 | 4083 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S2842-2.35 | ||
TREEFAM | TREEFAM_ID | TF105925 | ||||
DB_remark | PPA-NATC-2 protein; contains similarity to Pfam domain PF00583 (Acetyltransferase (GNAT) family); contains similarity to Interpro domains IPR000182 (GNAT domain), IPR016181 (Acyl-CoA N-acyltransferase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00106551 | ||||
Corresponding_transcript | PPA16997.1 | |||||
Corresponding_protein | PP74236 | |||||
Corresponding_oligo_set | GPL14372_Probes_61354 | |||||
GPL14372_Probes_61355 | ||||||
GPL14372_Probes_61356 | ||||||
GPL14372_Probes_61357 | ||||||
Microarray_results | GPL14372_Probes_61354 | |||||
GPL14372_Probes_61355 | ||||||
GPL14372_Probes_61356 | ||||||
GPL14372_Probes_61357 | ||||||
RNASeq_FPKM | WBls:0000032 | 30.2254 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S2842-2.35 | Curator_confirmed | WBPerson4055 | |||
Method | curated |