WormBase Tree Display for CDS: PPA17196
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PPA17196 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons (19) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S233-6.39 | ||
TREEFAM | TREEFAM_ID | TF314700 | ||||
DB_remark | PPA-PPM-1.H protein; contains similarity to Pfam domain PF00481 (Protein phosphatase 2C); contains similarity to Interpro domains IPR036457 (PPM-type phosphatase-like domain superfamily), IPR015655 (Protein phosphatase 2C), IPR001932 (PPM-type phosphatase-like domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00106750 | ||||
Corresponding_transcript | PPA17196.1 | |||||
Corresponding_protein | PP51321 | |||||
Corresponding_oligo_set | GPL14372_Probes_71034 | |||||
GPL14372_Probes_71035 | ||||||
GPL14372_Probes_71036 | ||||||
Microarray_results | GPL14372_Probes_71034 | |||||
GPL14372_Probes_71035 | ||||||
GPL14372_Probes_71036 | ||||||
RNASeq_FPKM | WBls:0000032 | 4.38995 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 18.1463 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S233-6.39 | Curator_confirmed | WBPerson4055 | |||
Method | curated |