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WormBase Tree Display for CDS: PPA17219

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Name Class

PPA17219SMapS_parentSequencePPA_ChrIV
StructureSource_exons (46)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S233-5.7
TREEFAMTREEFAM_IDTF314588
DB_remarkPPA-CHO-1 protein; contains similarity to Pfam domains PF00474 (Sodium:solute symporter family), PF07716 (Basic region leucine zipper); contains similarity to Interpro domains IPR038377 (Sodium/glucose symporter superfamily), IPR001734 (Sodium/solute symporter), IPR004827 (Basic-leucine zipper domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00106773
Corresponding_transcriptPPA17219.1
Corresponding_proteinPP65323
Corresponding_oligo_set (11)
Microarray_results (11)
RNASeq_FPKMWBls:00000322.67892From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.790894From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S233-5.7Curator_confirmedWBPerson4055
Methodcurated