WormBase Tree Display for CDS: PPA17392
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PPA17392 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 109 | |||
256 | 364 | |||||
536 | 671 | |||||
1301 | 1419 | |||||
1722 | 1790 | |||||
1885 | 1993 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-14.58 | ||
DB_remark | PPA-RAB-14 protein; contains similarity to Pfam domain PF00071 (Ras family); contains similarity to Interpro domains IPR030702 (Ras-related protein Rab14), IPR001806 (Small GTPase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR005225 (Small GTP-binding protein domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00106946 | ||||
Corresponding_transcript | PPA17392.1 | |||||
Corresponding_protein | PP12098 | |||||
Corresponding_oligo_set | GPL14372_Probes_72807 | |||||
GPL14372_Probes_72808 | ||||||
GPL14372_Probes_72809 | ||||||
GPL14372_Probes_72810 | ||||||
Microarray_results | GPL14372_Probes_72807 | |||||
GPL14372_Probes_72808 | ||||||
GPL14372_Probes_72809 | ||||||
GPL14372_Probes_72810 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 8.50913 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S207-14.58 | Curator_confirmed | WBPerson4055 | |||
Method | curated |