WormBase Tree Display for CDS: PPA17428
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PPA17428 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-16.7 | ||
DB_remark | PPA-STO-2 protein; contains similarity to Pfam domain PF01145 (SPFH domain / Band 7 family); contains similarity to Interpro domains IPR001972 (Stomatin/HflK family), IPR043202 (Band-7 stomatin-like), IPR036013 (Band 7/SPFH domain superfamily), IPR001107 (Band 7 domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00106982 | ||||
Corresponding_transcript | PPA17428.1 | |||||
Corresponding_protein | PP64944 | |||||
Corresponding_oligo_set | GPL14372_Probes_72706 | |||||
GPL14372_Probes_72707 | ||||||
GPL14372_Probes_72708 | ||||||
GPL14372_Probes_72710 | ||||||
Microarray_results | GPL14372_Probes_72706 | |||||
GPL14372_Probes_72707 | ||||||
GPL14372_Probes_72708 | ||||||
GPL14372_Probes_72710 | ||||||
RNASeq_FPKM | WBls:0000032 | 9.85546 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 5.82084 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S207-16.7 | Curator_confirmed | WBPerson4055 | |||
Method | curated |