WormBase Tree Display for CDS: PPA17470

PPA17470 Evidence: Curator_confirmed: WBPerson4055
  SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 111
      258 345
      623 737
      1319 1471
      1643 1814
      1970 2136
      2351 2459
  DB_info: Database: pristionchus.org cds gene-UMM-S139-19.23
      TREEFAM TREEFAM_ID TF105044
    DB_remark: PPA-HSP-3 protein; contains similarity to Pfam domains PF01096 (Transcription factor S-II (TFIIS)), PF02150 (RNA polymerases M/15 Kd subunit); contains similarity to Interpro domains IPR001222 (Zinc finger, TFIIS-type), IPR001529 (DNA-directed RNA polymerase, M/15kDa subunit)
  Origin: From_laboratory: HX
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00107024
    Corresponding_transcript: PPA17470.1
    Corresponding_protein: PP75487
    Corresponding_oligo_set: GPL14372_Probes_54747
      GPL14372_Probes_54748
      GPL14372_Probes_54749
      GPL14372_Probes_54750
      GPL14372_Probes_54751
    Microarray_results: GPL14372_Probes_54747
      GPL14372_Probes_54748
      GPL14372_Probes_54749
      GPL14372_Probes_54750
      GPL14372_Probes_54751
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 37.4848 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Last_reviewed: 08 Nov 2019 10:51:21 WBPerson4055
    Remark: [171116 mh6] renamed from gene-UMM-S139-19.23 Curator_confirmed: WBPerson4055
      [191108 mh6] This gene has been split based on the RNASeq data. Curator_confirmed: WBPerson4055
        From_analysis: RNASeq
  Method: curated