WormBase Tree Display for CDS: PPA17472a
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PPA17472a | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S139-18.33 | ||
DB_remark | PPA-SUCO-1 protein; contains similarity to Pfam domain PF07738 (Sad1 / UNC-like C-terminal); contains similarity to Interpro domain IPR012919 (SUN domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Isoform | Curator_confirmed | WBPerson4055 | ||||
Visible | Gene | WBGene00107026 | ||||
Corresponding_transcript | PPA17472a.1 | |||||
Corresponding_protein | PP75503 | |||||
Corresponding_oligo_set | GPL14372_Probes_54752 | |||||
Microarray_results | GPL14372_Probes_54752 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 08 Nov 2019 11:07:44 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S139-18.33 | Curator_confirmed | WBPerson4055 | |||
[191108 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |