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WormBase Tree Display for CDS: PPA17472a

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Name Class

PPA17472aEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-18.33
DB_remarkPPA-SUCO-1 protein; contains similarity to Pfam domain PF07738 (Sad1 / UNC-like C-terminal); contains similarity to Interpro domain IPR012919 (SUN domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
IsoformCurator_confirmedWBPerson4055
VisibleGeneWBGene00107026
Corresponding_transcriptPPA17472a.1
Corresponding_proteinPP75503
Corresponding_oligo_setGPL14372_Probes_54752
Microarray_resultsGPL14372_Probes_54752
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed08 Nov 2019 11:07:44WBPerson4055
Remark[171116 mh6] renamed from gene-UMM-S139-18.33Curator_confirmedWBPerson4055
[191108 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated