WormBase Tree Display for CDS: PPA17523
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PPA17523 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 75 | |||
380 | 487 | |||||
1182 | 1281 | |||||
3108 | 3213 | |||||
3755 | 3893 | |||||
4647 | 4777 | |||||
5919 | 6021 | |||||
6100 | 6176 | |||||
6441 | 6594 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S139-16.27 | ||
DB_remark | contains similarity to Pfam domain PF01764 (Lipase (class 3)); contains similarity to Interpro domains IPR002921 (Fungal lipase-like domain), IPR029058 (Alpha/Beta hydrolase fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107077 | ||||
Corresponding_transcript | PPA17523.1 | |||||
Corresponding_protein | PP68747 | |||||
Corresponding_oligo_set | GPL14372_Probes_30743 | |||||
GPL14372_Probes_87246 | ||||||
GPL14372_Probes_87247 | ||||||
Microarray_results | GPL14372_Probes_30743 | |||||
GPL14372_Probes_87246 | ||||||
GPL14372_Probes_87247 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S139-16.27 | Curator_confirmed | WBPerson4055 | |||
Method | curated |