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WormBase Tree Display for CDS: PPA17530

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Name Class

PPA17530SMapS_parentSequencePPA_ChrI
StructureSource_exons (18)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-15.35
DB_remarkcontains similarity to Pfam domain PF00001 (7 transmembrane receptor (rhodopsin family)); contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like, 7TM)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107084
Corresponding_transcriptPPA17530.1
Corresponding_proteinPP57579
Corresponding_oligo_setGPL14372_Probes_87258
GPL14372_Probes_87259
Microarray_resultsGPL14372_Probes_87258
GPL14372_Probes_87259
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-15.35Curator_confirmedWBPerson4055
Methodcurated