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WormBase Tree Display for CDS: PPA17535

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Name Class

PPA17535SMapS_parentSequencePPA_ChrI
StructureSource_exons (54)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S139-15.26
DB_remarkcontains similarity to Pfam domain PF01871 (AMMECR1); contains similarity to Interpro domains IPR002733 (AMMECR1 domain), IPR027485 (AMMECR1, N-terminal), IPR023473 (AMMECR1), IPR036071 (AMMECR1 domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00107089
Corresponding_transcriptPPA17535.1
Corresponding_proteinPP67463
Corresponding_oligo_setGPL14372_Probes_30751
GPL14372_Probes_30752
GPL14372_Probes_30754
GPL14372_Probes_87270
GPL14372_Probes_87271
GPL14372_Probes_87279
GPL14372_Probes_87280
GPL14372_Probes_87281
GPL14372_Probes_87282
GPL14372_Probes_87283
Matching_cDNACN657239Inferred_automaticallytranscript_builder.pl
CN656630Inferred_automaticallytranscript_builder.pl
CN656814Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_30751
GPL14372_Probes_30752
GPL14372_Probes_30754
GPL14372_Probes_87270
GPL14372_Probes_87271
GPL14372_Probes_87279
GPL14372_Probes_87280
GPL14372_Probes_87281
GPL14372_Probes_87282
GPL14372_Probes_87283
RNASeq_FPKMWBls:00000323.30625From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001016.83275From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S139-15.26Curator_confirmedWBPerson4055
Methodcurated