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WormBase Tree Display for CDS: PPA17541

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Name Class

PPA17541SMapS_parentSequencePPA_ChrI
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S139-15.24
TREEFAMTREEFAM_IDTF322484
DB_remarkcontains similarity to Pfam domain PF00149 (Calcineurin-like phosphoesterase); contains similarity to Interpro domains IPR029052 (Metallo-dependent phosphatase-like), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107095
Corresponding_transcriptPPA17541.1
Corresponding_proteinPP55925
Corresponding_oligo_setGPL14372_Probes_30757
Microarray_resultsGPL14372_Probes_30757
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S139-15.24Curator_confirmedWBPerson4055
Methodcurated