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WormBase Tree Display for CDS: PPA17551

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Name Class

PPA17551SMapS_parentSequencePPA_ChrI
StructureSource_exons (25)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-15.29
DB_remarkcontains similarity to Pfam domain PF01485 (IBR domain, a half RING-finger domain); contains similarity to Interpro domains IPR031127 (E3 ubiquitin ligase RBR family), IPR002867 (IBR domain), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107105
Corresponding_transcriptPPA17551.1
Corresponding_proteinPP66498
Corresponding_oligo_setGPL14372_Probes_30773
GPL14372_Probes_30774
GPL14372_Probes_30775
GPL14372_Probes_30776
GPL14372_Probes_87290
GPL14372_Probes_87291
GPL14372_Probes_87292
Microarray_resultsGPL14372_Probes_30773
GPL14372_Probes_30774
GPL14372_Probes_30775
GPL14372_Probes_30776
GPL14372_Probes_87290
GPL14372_Probes_87291
GPL14372_Probes_87292
RNASeq_FPKMWBls:000003213.5803From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.782From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-15.29Curator_confirmedWBPerson4055
Methodcurated