WormBase Tree Display for CDS: PPA17566
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PPA17566 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 87 | |||
332 | 436 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S139-13.7 | ||
DB_remark | PPA-ELPC-3.3 protein; contains similarity to Pfam domain PF00583 (Acetyltransferase (GNAT) family); contains similarity to Interpro domains IPR039661 (ELP3/YhcC), IPR034687 (Elongator complex protein 3-like), IPR000182 (GNAT domain), IPR016181 (Acyl-CoA N-acyltransferase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
End_not_found | ||||||
Visible | Gene | WBGene00107120 | ||||
Corresponding_transcript | PPA17566.1 | |||||
Corresponding_protein | PP59608 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S139-13.7 | Curator_confirmed | WBPerson4055 | |||
Method | curated |