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WormBase Tree Display for CDS: PPA17634

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Name Class

PPA17634SMapS_parentSequencePPA_ChrI
StructureSource_exons (30)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-58.21
DB_remarkcontains similarity to Pfam domain PF00443 (Ubiquitin carboxyl-terminal hydrolase); contains similarity to Interpro domains IPR038765 (Papain-like cysteine peptidase superfamily), IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107188
Corresponding_transcriptPPA17634.1
Corresponding_proteinPP54782
Corresponding_oligo_setGPL14372_Probes_8659
GPL14372_Probes_8661
GPL14372_Probes_8663
GPL14372_Probes_8664
GPL14372_Probes_8665
Microarray_resultsGPL14372_Probes_8659
GPL14372_Probes_8661
GPL14372_Probes_8663
GPL14372_Probes_8664
GPL14372_Probes_8665
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-58.21Curator_confirmedWBPerson4055
Methodcurated