WormBase Tree Display for CDS: PPA17712
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PPA17712 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 133 | |||
1838 | 1911 | |||||
3397 | 3505 | |||||
4006 | 4019 | |||||
4785 | 4909 | |||||
5162 | 5246 | |||||
5404 | 5487 | |||||
5544 | 5621 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-53.21 | ||
DB_remark | contains similarity to Pfam domain PF00042 (Globin); contains similarity to Interpro domains IPR000971 (Globin), IPR012292 (Globin/Protoglobin), IPR009050 (Globin-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00107266 | ||||
Corresponding_transcript | PPA17712.1 | |||||
Corresponding_protein | PP63344 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-53.21 | Curator_confirmed | WBPerson4055 | |||
Method | curated |