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WormBase Tree Display for CDS: PPA17714

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Name Class

PPA17714SMapS_parentSequencePPA_ChrI
StructureSource_exons161
261340
389449
566618
9891102
13521414
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-53.31
TREEFAMTREEFAM_IDTF317875
DB_remarkcontains similarity to Pfam domain PF14534 (Domain of unknown function (DUF4440)); contains similarity to Interpro domains IPR027843 (Domain of unknown function DUF4440), IPR032710 (NTF2-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107268
Corresponding_transcriptPPA17714.1
Corresponding_proteinPP31565
Corresponding_oligo_setGPL14372_Probes_53464
GPL14372_Probes_53465
Microarray_resultsGPL14372_Probes_53464
GPL14372_Probes_53465
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-53.31Curator_confirmedWBPerson4055
Methodcurated