WormBase Tree Display for CDS: PPA17714
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PPA17714 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 61 | |||
261 | 340 | |||||
389 | 449 | |||||
566 | 618 | |||||
989 | 1102 | |||||
1352 | 1414 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-53.31 | ||
TREEFAM | TREEFAM_ID | TF317875 | ||||
DB_remark | contains similarity to Pfam domain PF14534 (Domain of unknown function (DUF4440)); contains similarity to Interpro domains IPR027843 (Domain of unknown function DUF4440), IPR032710 (NTF2-like domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107268 | ||||
Corresponding_transcript | PPA17714.1 | |||||
Corresponding_protein | PP31565 | |||||
Corresponding_oligo_set | GPL14372_Probes_53464 | |||||
GPL14372_Probes_53465 | ||||||
Microarray_results | GPL14372_Probes_53464 | |||||
GPL14372_Probes_53465 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-53.31 | Curator_confirmed | WBPerson4055 | |||
Method | curated |