WormBase Tree Display for CDS: PPA17893
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PPA17893 | SMap | S_parent | Sequence | PPA_ChrIII | |
---|---|---|---|---|---|
Structure | Source_exons (46) | ||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2874-6.44 | |
DB_remark | contains similarity to Pfam domains PF00069 (Protein kinase domain), PF02214 (BTB/POZ domain), PF03607 (Doublecortin); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000210 (BTB/POZ domain), IPR001680 (WD40 repeat), IPR000719 (Protein kinase domain), IPR036322 (WD40-repeat-containing domain superfamily), IPR003533 (Doublecortin domain), IPR011333 (SKP1/BTB/POZ domain superfamily), IPR036572 (Doublecortin domain superfamily), IPR003131 (Potassium channel tetramerisation-type BTB domain), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | ||||
Origin | From_laboratory | RS | |||
Species | Pristionchus pacificus | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | pristionchus.org | ||||
Prediction_status | Predicted | ||||
Visible | Gene | WBGene00107447 | |||
Corresponding_transcript | PPA17893.1 | ||||
Corresponding_protein | PP70212 | ||||
Corresponding_oligo_set | GPL14372_Probes_21149 | ||||
GPL14372_Probes_21150 | |||||
GPL14372_Probes_73099 | |||||
GPL14372_Probes_73101 | |||||
GPL14372_Probes_73102 | |||||
GPL14372_Probes_73103 | |||||
GPL14372_Probes_73104 | |||||
GPL14372_Probes_73105 | |||||
Microarray_results | GPL14372_Probes_21149 | ||||
GPL14372_Probes_21150 | |||||
GPL14372_Probes_73099 | |||||
GPL14372_Probes_73101 | |||||
GPL14372_Probes_73102 | |||||
GPL14372_Probes_73103 | |||||
GPL14372_Probes_73104 | |||||
GPL14372_Probes_73105 | |||||
RNASeq_FPKM (2) | |||||
Remark | [171116 mh6] renamed from gene-UMM-S2874-6.44 | Curator_confirmed | WBPerson4055 | ||
Method | curated |