WormBase Tree Display for CDS: PPA17901
expand all nodes | collapse all nodes | view schema
PPA17901 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrIII | |||
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2874-6.47 | ||
TREEFAM | TREEFAM_ID | TF105813 | ||||
DB_remark | contains similarity to Pfam domain PF02582 (RMND1/Sif2-Sif3/Mrx10, DUF155); contains similarity to Interpro domain IPR003734 (Domain of unknown function DUF155) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107455 | ||||
Corresponding_transcript | PPA17901.1 | |||||
Corresponding_protein | PP24263 | |||||
Corresponding_oligo_set | GPL14372_Probes_73085 | |||||
GPL14372_Probes_73086 | ||||||
GPL14372_Probes_73087 | ||||||
Microarray_results | GPL14372_Probes_73085 | |||||
GPL14372_Probes_73086 | ||||||
GPL14372_Probes_73087 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 25.3242 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2874-6.47 | Curator_confirmed | WBPerson4055 | |||
Method | curated |