WormBase Tree Display for CDS: PPA18029
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PPA18029 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 30 | |||
78 | 166 | |||||
279 | 383 | |||||
435 | 498 | |||||
597 | 663 | |||||
741 | 799 | |||||
844 | 897 | |||||
981 | 1072 | |||||
1130 | 1307 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-27.65 | ||
DB_remark | contains similarity to Pfam domain PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx); contains similarity to Interpro domains IPR019424 (Serpentine type 7TM GPCR chemoreceptor Srsx), IPR000276 (G protein-coupled receptor, rhodopsin-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107583 | ||||
Corresponding_transcript | PPA18029.1 | |||||
Corresponding_protein | PP65222 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-27.65 | Curator_confirmed | WBPerson4055 | |||
Method | curated |