WormBase Tree Display for CDS: PPA18030
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PPA18030 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 101 | |||
1078 | 1166 | |||||
1225 | 1391 | |||||
1659 | 1737 | |||||
1811 | 1938 | |||||
1986 | 2024 | |||||
2420 | 2581 | |||||
2924 | 3037 | |||||
3116 | 3247 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-33.23 | ||
DB_remark | contains similarity to Pfam domain PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd); contains similarity to Interpro domain IPR019421 (7TM GPCR, serpentine receptor class d (Srd)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107584 | ||||
Corresponding_transcript | PPA18030.1 | |||||
Corresponding_protein | PP51264 | |||||
Corresponding_oligo_set | GPL14372_Probes_635 | |||||
GPL14372_Probes_636 | ||||||
GPL14372_Probes_638 | ||||||
Microarray_results | GPL14372_Probes_635 | |||||
GPL14372_Probes_636 | ||||||
GPL14372_Probes_638 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-33.23 | Curator_confirmed | WBPerson4055 | |||
Method | curated |