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WormBase Tree Display for CDS: PPA18071

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Name Class

PPA18071SMapS_parentSequencePPA_ChrI
StructureSource_exons1153
258371
559618
14681530
18061844
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-25.47
TREEFAMTREEFAM_IDTF300139
DB_remarkPPA-APS-2 protein; contains similarity to Pfam domain PF01217 (Clathrin adaptor complex small chain); contains similarity to Interpro domains IPR022775 (AP complex, mu/sigma subunit), IPR027156 (AP-2 complex subunit sigma), IPR016635 (Adaptor protein complex, sigma subunit), IPR011012 (Longin-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107625
Corresponding_transcriptPPA18071.1
Corresponding_proteinPP64876
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-25.47Curator_confirmedWBPerson4055
Methodcurated