WormBase Tree Display for CDS: PPA18111
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PPA18111 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 107 | |||
330 | 411 | |||||
504 | 545 | |||||
1094 | 1142 | |||||
1412 | 1484 | |||||
1812 | 1926 | |||||
2129 | 2211 | |||||
2554 | 2641 | |||||
2745 | 2810 | |||||
3514 | 3579 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-23.12 | ||
DB_remark | PPA-AEX-4 protein; contains similarity to Interpro domain IPR000727 (Target SNARE coiled-coil homology domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00107665 | ||||
Corresponding_transcript | PPA18111.1 | |||||
Corresponding_protein | PP57597 | |||||
Corresponding_oligo_set | GPL14372_Probes_35836 | |||||
GPL14372_Probes_35837 | ||||||
Microarray_results | GPL14372_Probes_35836 | |||||
GPL14372_Probes_35837 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-23.12 | Curator_confirmed | WBPerson4055 | |||
Method | curated |