WormBase Tree Display for CDS: PPA18114
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PPA18114 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 143 | |||
275 | 391 | |||||
441 | 583 | |||||
752 | 858 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-23.26 | ||
DB_remark | contains similarity to Pfam domain PF08719 (NADAR domain); contains similarity to Interpro domains IPR037238 (YbiA-like superfamily), IPR012816 (NADAR) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107668 | ||||
Corresponding_transcript | PPA18114.1 | |||||
Corresponding_protein | PP66682 | |||||
Corresponding_oligo_set | GPL14372_Probes_452 | |||||
GPL14372_Probes_453 | ||||||
GPL14372_Probes_454 | ||||||
Microarray_results | GPL14372_Probes_452 | |||||
GPL14372_Probes_453 | ||||||
GPL14372_Probes_454 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-23.26 | Curator_confirmed | WBPerson4055 | |||
Method | curated |