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WormBase Tree Display for CDS: PPA18138

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Name Class

PPA18138SMapS_parentSequencePPA_ChrI
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-21.4
DB_remarkcontains similarity to Pfam domain PF07767 (Nop53 (60S ribosomal biogenesis)); contains similarity to Interpro domain IPR011687 (Ribosome biogenesis protein Nop53/GLTSCR2)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00107692
Corresponding_transcriptPPA18138.1
Corresponding_proteinPP63771
Corresponding_oligo_setGPL14372_Probes_35816
GPL14372_Probes_35817
GPL14372_Probes_35819
Matching_cDNAAW097494Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_35816
GPL14372_Probes_35817
GPL14372_Probes_35819
RNASeq_FPKMWBls:000003220.545From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010117.3324From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-21.4Curator_confirmedWBPerson4055
Methodcurated