WormBase Tree Display for CDS: PPA18184
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PPA18184 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 65 | |||
162 | 315 | |||||
559 | 636 | |||||
1252 | 1343 | |||||
1504 | 1561 | |||||
1606 | 1657 | |||||
1704 | 1771 | |||||
1867 | 2055 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-18.6 | ||
DB_remark | contains similarity to Pfam domain PF10321 (Serpentine type 7TM GPCR chemoreceptor Srt); contains similarity to Interpro domain IPR019425 (7TM GPCR, serpentine receptor class t (Srt)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107738 | ||||
Corresponding_transcript | PPA18184.1 | |||||
Corresponding_protein | PP70902 | |||||
Corresponding_oligo_set | GPL14372_Probes_389 | |||||
GPL14372_Probes_391 | ||||||
GPL14372_Probes_393 | ||||||
Microarray_results | GPL14372_Probes_389 | |||||
GPL14372_Probes_391 | ||||||
GPL14372_Probes_393 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-18.6 | Curator_confirmed | WBPerson4055 | |||
Method | curated |