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WormBase Tree Display for CDS: PPA18220

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Name Class

PPA18220SMapS_parentSequencePPA_ChrI
StructureSource_exons115
217305
534586
802886
10801140
12121287
13571394
DB_infoDatabasepristionchus.orgcdsgene-UMS-S7-16.22
DB_remarkcontains similarity to Interpro domains IPR035979 (RNA-binding domain superfamily), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107774
Corresponding_transcriptPPA18220.1
Corresponding_proteinPP58788
Corresponding_oligo_setGPL14372_Probes_344
GPL14372_Probes_345
Microarray_resultsGPL14372_Probes_344
GPL14372_Probes_345
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S7-16.22Curator_confirmedWBPerson4055
Methodcurated