WormBase Tree Display for CDS: PPA18266
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PPA18266 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S7-13.42 | ||
DB_remark | PPA-TWK-46 protein; contains similarity to Pfam domain PF07885 (Ion channel); contains similarity to Interpro domains IPR003280 (Two pore domain potassium channel), IPR005408 (Two pore domain potassium channel, TWIK family), IPR013099 (Potassium channel domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107820 | ||||
Corresponding_transcript | PPA18266.1 | |||||
Corresponding_protein | PP59476 | |||||
Corresponding_oligo_set | GPL14372_Probes_35631 | |||||
Microarray_results | GPL14372_Probes_35631 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S7-13.42 | Curator_confirmed | WBPerson4055 | |||
Method | curated |