WormBase Tree Display for CDS: PPA18277
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PPA18277 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (33) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-12.11 | ||
DB_remark | PPA-DAAM-1 protein; contains similarity to Pfam domains PF02181 (Formin Homology 2 Domain), PF06367 (Diaphanous FH3 Domain), PF06371 (Diaphanous GTPase-binding Domain); contains similarity to Interpro domains IPR010473 (Formin, GTPase-binding domain), IPR010472 (Formin, FH3 domain), IPR015425 (Formin, FH2 domain), IPR042201 (Formin, FH2 domain superfamily), IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107831 | ||||
Corresponding_transcript | PPA18277.1 | |||||
Corresponding_protein | PP71963 | |||||
Corresponding_oligo_set | GPL14372_Probes_278 | |||||
GPL14372_Probes_279 | ||||||
GPL14372_Probes_280 | ||||||
Microarray_results | GPL14372_Probes_278 | |||||
GPL14372_Probes_279 | ||||||
GPL14372_Probes_280 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-12.11 | Curator_confirmed | WBPerson4055 | |||
Method | curated |