WormBase Tree Display for CDS: PPA18280
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| PPA18280 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (25) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S7-12.10 | ||
| DB_remark | contains similarity to Pfam domains PF00089 (Trypsin), PF03761 (Nematode trypsin-6-like family); contains similarity to Interpro domains IPR043504 (Peptidase S1, PA clan, chymotrypsin-like fold), IPR005514 (Chymotrypsin family Peptidase-S1), IPR001254 (Serine proteases, trypsin domain), IPR009003 (Peptidase S1, PA clan) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00107834 | ||||
| Corresponding_transcript | PPA18280.1 | |||||
| Corresponding_protein | PP68527 | |||||
| Corresponding_oligo_set | GPL14372_Probes_274 | |||||
| Microarray_results | GPL14372_Probes_274 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S7-12.10 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
