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WormBase Tree Display for CDS: PPA18289

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Name Class

PPA18289SMapS_parentSequencePPA_ChrI
StructureSource_exons (23)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S7-12.13
DB_remarkPPA-DYCI-1 protein; contains similarity to Pfam domain PF00400 (WD domain, G-beta repeat); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR036322 (WD40-repeat-containing domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107843
Corresponding_transcriptPPA18289.1
Corresponding_proteinPP55089
Corresponding_oligo_setGPL14372_Probes_253
Microarray_resultsGPL14372_Probes_253
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S7-12.13Curator_confirmedWBPerson4055
Methodcurated