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WormBase Tree Display for CDS: PPA18346

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Name Class

PPA18346SMapS_parentSequencePPA_ChrI
StructureSource_exons1136
449561
780854
11281169
13411430
22142291
26552740
58265991
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-7.45
TREEFAMTREEFAM_IDTF315055
DB_remarkcontains similarity to Pfam domain PF04893 (Yip1 domain); contains similarity to Interpro domain IPR006977 (Yip1 domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00107900
Corresponding_transcriptPPA18346.1
Corresponding_proteinPP68678
Corresponding_oligo_setGPL14372_Probes_143
GPL14372_Probes_35560
GPL14372_Probes_35561
GPL14372_Probes_35562
GPL14372_Probes_35563
Matching_cDNABM320646Inferred_automaticallytranscript_builder.pl
AW144987Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_143
GPL14372_Probes_35560
GPL14372_Probes_35561
GPL14372_Probes_35562
GPL14372_Probes_35563
RNASeq_FPKMWBls:000003211.0717From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001016.53945From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-7.45Curator_confirmedWBPerson4055
Methodcurated