WormBase Tree Display for CDS: PPA18365
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PPA18365 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S245-7.46 | ||
DB_remark | contains similarity to Pfam domain PF00149 (Calcineurin-like phosphoesterase); contains similarity to Interpro domains IPR029052 (Metallo-dependent phosphatase-like), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107919 | ||||
Corresponding_transcript | PPA18365.1 | |||||
Corresponding_protein | PP59678 | |||||
Corresponding_oligo_set | GPL14372_Probes_67380 | |||||
GPL14372_Probes_67381 | ||||||
Microarray_results | GPL14372_Probes_67380 | |||||
GPL14372_Probes_67381 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 32.6526 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S245-7.46 | Curator_confirmed | WBPerson4055 | |||
Method | curated |