WormBase Tree Display for CDS: PPA18366
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PPA18366 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons | 3 | 103 | |||
723 | 844 | |||||
1239 | 1537 | |||||
1690 | 1849 | |||||
2090 | 2280 | |||||
2332 | 2460 | |||||
2515 | 2613 | |||||
2679 | 2855 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S245-7.36 | ||
DB_remark | PPA-ATF-2 protein; contains similarity to Pfam domain PF07716 (Basic region leucine zipper); contains similarity to Interpro domain IPR004827 (Basic-leucine zipper domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00107920 | ||||
Corresponding_transcript | PPA18366.1 | |||||
Corresponding_protein | PP74437 | |||||
Corresponding_oligo_set | GPL14372_Probes_17348 | |||||
GPL14372_Probes_17349 | ||||||
GPL14372_Probes_17350 | ||||||
GPL14372_Probes_17351 | ||||||
GPL14372_Probes_17352 | ||||||
Microarray_results | GPL14372_Probes_17348 | |||||
GPL14372_Probes_17349 | ||||||
GPL14372_Probes_17350 | ||||||
GPL14372_Probes_17351 | ||||||
GPL14372_Probes_17352 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 21 Feb 2019 09:51:16 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S245-7.36 | Curator_confirmed | WBPerson4055 | |||
[190221 mh6] updated to the latest set provided my MPG | Curator_confirmed | WBPerson18244 | ||||
Method | curated |