WormBase Tree Display for CDS: PPA18403
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PPA18403 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 70 | |||
619 | 697 | |||||
770 | 812 | |||||
1010 | 1129 | |||||
1226 | 1342 | |||||
1463 | 1559 | |||||
1910 | 2023 | |||||
2130 | 2227 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S245-9.1 | ||
DB_remark | contains similarity to Pfam domain PF04970 (Lecithin retinol acyltransferase); contains similarity to Interpro domain IPR007053 (LRAT domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107957 | ||||
Corresponding_transcript | PPA18403.1 | |||||
Corresponding_protein | PP51574 | |||||
Corresponding_oligo_set | GPL14372_Probes_67541 | |||||
GPL14372_Probes_67544 | ||||||
Microarray_results | GPL14372_Probes_67541 | |||||
GPL14372_Probes_67544 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 28.5038 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S245-9.1 | Curator_confirmed | WBPerson4055 | |||
Method | curated |