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WormBase Tree Display for CDS: PPA18411

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Name Class

PPA18411SMapS_parentSequencePPA_ChrII
StructureSource_exons11854
19061985
20692204
DB_infoDatabasepristionchus.orgcdsgene-UMM-S245-9.4
DB_remarkcontains similarity to Pfam domains PF13086 (AAA domain), PF13087 (AAA domain); contains similarity to Interpro domains IPR041679 (DNA2/NAM7 helicase-like, C-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR041677 (DNA2/NAM7 helicase, helicase domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00107965
Corresponding_transcriptPPA18411.1
Corresponding_proteinPP35235
Corresponding_oligo_setGPL14372_Probes_67564
GPL14372_Probes_67565
GPL14372_Probes_67566
GPL14372_Probes_67567
Matching_cDNABI500666Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_67564
GPL14372_Probes_67565
GPL14372_Probes_67566
GPL14372_Probes_67567
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S245-9.4Curator_confirmedWBPerson4055
Methodcurated