WormBase Tree Display for CDS: PPA18415
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PPA18415 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 6 | |||
57 | 125 | |||||
349 | 440 | |||||
490 | 563 | |||||
608 | 666 | |||||
714 | 753 | |||||
801 | 862 | |||||
916 | 990 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S245-9.80 | ||
DB_remark | contains similarity to Pfam domain PF00412 (LIM domain); contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00107969 | ||||
Corresponding_transcript | PPA18415.1 | |||||
Corresponding_protein | PP60355 | |||||
Corresponding_oligo_set | GPL14372_Probes_67573 | |||||
GPL14372_Probes_67574 | ||||||
Microarray_results | GPL14372_Probes_67573 | |||||
GPL14372_Probes_67574 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 13.9087 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S245-9.80 | Curator_confirmed | WBPerson4055 | |||
Method | curated |