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WormBase Tree Display for CDS: PPA18530

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Name Class

PPA18530SMapS_parentSequencePPA_ChrII
StructureSource_exons (30)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S245-14.28
DB_remarkcontains similarity to Pfam domains PF00149 (Calcineurin-like phosphoesterase), PF00999 (Sodium/hydrogen exchanger family); contains similarity to Interpro domains IPR018422 (Cation/H+ exchanger, CPA1 family), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase), IPR006153 (Cation/H+ exchanger), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type), IPR004709 (Na+/H+ exchanger)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00108084
Corresponding_transcriptPPA18530.1
Corresponding_proteinPP56778
Corresponding_oligo_setGPL14372_Probes_67896
GPL14372_Probes_67899
Microarray_resultsGPL14372_Probes_67896
GPL14372_Probes_67899
RNASeq_FPKMWBls:00000328.4063From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001018.50924From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S245-14.28Curator_confirmedWBPerson4055
Methodcurated