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WormBase Tree Display for CDS: PPA18554

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Name Class

PPA18554EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons1117
217299
346430
473572
742818
9081018
DB_infoDatabasepristionchus.orgcdsgene-UMM-S245-16.62
DB_remarkcontains similarity to Pfam domain PF01682 (DB module); contains similarity to Interpro domain IPR002602 (Domain of unknown function DB)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00108108
Corresponding_transcriptPPA18554.1
Corresponding_proteinPP75392
Corresponding_oligo_setGPL14372_Probes_68009
GPL14372_Probes_68011
GPL14372_Probes_68012
GPL14372_Probes_68013
Microarray_resultsGPL14372_Probes_68009
GPL14372_Probes_68011
GPL14372_Probes_68012
GPL14372_Probes_68013
RNASeq_FPKMWBls:000003217.4382From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010130.9058From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed25 Sep 2019 14:32:29WBPerson4055
Remark[171116 mh6] renamed from gene-UMM-S245-16.62Curator_confirmedWBPerson4055
[190925 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated