WormBase Tree Display for CDS: PPA18554
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PPA18554 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons | 1 | 117 | |||
217 | 299 | |||||
346 | 430 | |||||
473 | 572 | |||||
742 | 818 | |||||
908 | 1018 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S245-16.62 | ||
DB_remark | contains similarity to Pfam domain PF01682 (DB module); contains similarity to Interpro domain IPR002602 (Domain of unknown function DB) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00108108 | ||||
Corresponding_transcript | PPA18554.1 | |||||
Corresponding_protein | PP75392 | |||||
Corresponding_oligo_set | GPL14372_Probes_68009 | |||||
GPL14372_Probes_68011 | ||||||
GPL14372_Probes_68012 | ||||||
GPL14372_Probes_68013 | ||||||
Microarray_results | GPL14372_Probes_68009 | |||||
GPL14372_Probes_68011 | ||||||
GPL14372_Probes_68012 | ||||||
GPL14372_Probes_68013 | ||||||
RNASeq_FPKM | WBls:0000032 | 17.4382 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 30.9058 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 25 Sep 2019 14:32:29 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S245-16.62 | Curator_confirmed | WBPerson4055 | |||
[190925 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |