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WormBase Tree Display for CDS: PPA18563

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Name Class

PPA18563SMapS_parentSequencePPA_ChrII
StructureSource_exons (23)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-63.45
DB_remarkcontains similarity to Pfam domains PF00059 (Lectin C-type domain), PF13519 (von Willebrand factor type A domain); contains similarity to Interpro domains IPR036465 (von Willebrand factor A-like domain superfamily), IPR016186 (C-type lectin-like/link domain superfamily), IPR001304 (C-type lectin-like), IPR002035 (von Willebrand factor, type A), IPR016187 (C-type lectin fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00108117
Corresponding_transcriptPPA18563.1
Corresponding_proteinPP65040
Corresponding_oligo_setGPL14372_Probes_16709
GPL14372_Probes_16710
GPL14372_Probes_16711
Microarray_resultsGPL14372_Probes_16709
GPL14372_Probes_16710
GPL14372_Probes_16711
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-63.45Curator_confirmedWBPerson4055
Methodcurated