WormBase Tree Display for CDS: PPA18570
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PPA18570 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (26) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S245-16.69 | ||
DB_remark | contains similarity to Pfam domain PF00005 (ABC transporter); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR003439 (ABC transporter-like, ATP-binding domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00108124 | ||||
Corresponding_transcript | PPA18570.1 | |||||
Corresponding_protein | PP65373 | |||||
Corresponding_oligo_set | GPL14372_Probes_68055 | |||||
GPL14372_Probes_68056 | ||||||
GPL14372_Probes_68058 | ||||||
Microarray_results | GPL14372_Probes_68055 | |||||
GPL14372_Probes_68056 | ||||||
GPL14372_Probes_68058 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.3046 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S245-16.69 | Curator_confirmed | WBPerson4055 | |||
Method | curated |