Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA18586

expand all nodes | collapse all nodes | view schema

Name Class

PPA18586SMapS_parentSequencePPA_ChrII
StructureSource_exons (43)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S245-17.64
TREEFAMTREEFAM_IDTF300540
DB_remarkPPA-CTL-1 protein; contains similarity to Pfam domains PF00199 (Catalase), PF01757 (Acyltransferase family), PF06628 (Catalase-related immune-responsive); contains similarity to Interpro domains IPR018028 (Catalase, mono-functional, haem-containing), IPR011614 (Catalase core domain), IPR006621 (Nose resistant-to-fluoxetine protein, N-terminal), IPR002656 (Acyltransferase 3 domain), IPR020835 (Catalase superfamily), IPR010582 (Catalase immune-responsive domain), IPR037060 ()
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00108140
Corresponding_transcriptPPA18586.1
Corresponding_proteinPP67860
Corresponding_oligo_setGPL14372_Probes_68095
GPL14372_Probes_68096
GPL14372_Probes_68098
GPL14372_Probes_68099
Matching_cDNAAW114250Inferred_automaticallytranscript_builder.pl
FG100270Inferred_automaticallytranscript_builder.pl
BI773589Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_68095
GPL14372_Probes_68096
GPL14372_Probes_68098
GPL14372_Probes_68099
RNASeq_FPKMWBls:00000328.76473From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.60026From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S245-17.64Curator_confirmedWBPerson4055
Methodcurated