WormBase Tree Display for CDS: PPA18622
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PPA18622 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (25) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-75.34 | ||
TREEFAM | TREEFAM_ID | TF106432 | ||||
DB_remark | contains similarity to Pfam domain PF04437 (RINT-1/TIP-1 family); contains similarity to Interpro domain IPR007528 (RINT-1/Tip20) | |||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00108176 | ||||
Corresponding_transcript | PPA18622.1 | |||||
Corresponding_protein | PP75084 | |||||
Corresponding_oligo_set | GPL14372_Probes_60101 | |||||
GPL14372_Probes_60102 | ||||||
GPL14372_Probes_60103 | ||||||
GPL14372_Probes_60104 | ||||||
Microarray_results | GPL14372_Probes_60101 | |||||
GPL14372_Probes_60102 | ||||||
GPL14372_Probes_60103 | ||||||
GPL14372_Probes_60104 | ||||||
RNASeq_FPKM | WBls:0000032 | 9.63417 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 13.2741 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 24 Jul 2019 16:33:28 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S7-75.34 | Curator_confirmed | WBPerson4055 | |||
[190724 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |